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CEE618S13

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240
jackmen
08-10-2016
05:52 AM ET (US)
I know your skill on this. I must say we ought to have an online exchange on this. Composing just remarks will close the exchange straight away! Also, will confine the advantages from this data. http://www.floridanetworkrealty.com/avonda...e-jacksonville.aspx
239
Albert S. Kim
04-26-2013
12:10 AM ET (US)
Dear Tony:

As I indicated in the forum, PBS is not working now.
Just use commands in console prompt.

Albert




On Thu, Apr 25, 2013 at 12:52 PM, QT - Tony Shing <
qtopic-50-3sKyquvjFQH@quicktopic.com> wrote:

>
< replied-to message removed by QT >
238
Tony Shing
04-25-2013
06:52 PM ET (US)
Hi Dr. Kim,

  I'm having trouble using PBS. this is my PBS script and I get the following error:

SCRIPT:

#!/bin/bash
#PBS -l walltime=01:00:00
#PBS -q batch
#PBS -l nodes=16:ppn=1
#PBS -N solution1
#PBS -V
cd $PBS_O_WORKDIR
mpirun -np 4 a.out

ERROR:

Cannot connect to default server host 'localhost' - check pbs_server daemon.
qsub: cannot connect to server localhost (errno=111) Connection refused

everything in is /home/mpiuser009/final

Tony
237
Edmund
04-25-2013
04:23 AM ET (US)
Dr. Kim,

I am getting an error when I try and run a parallel run. The error I get looks like:

$ decomposePar
decomposePar: error while loading shared libraries: libscotch.so: cannont open shared object file: No such file or directory

I included the decomposeParDict file in my /system/ directory, but am I forgetting to include a command or file before executing decomposePar?

Files in /home/mpiuser010/cee618/project/angle/
Edited 04-25-2013 01:50 PM
236
Edmund
04-25-2013
02:54 AM ET (US)
Dr. Kim,

I realized that OpenFOAM doesn't like multiple volumes and meshes coming from a single defined volume works better. I got my mesh to run, but now the results I put into ParaView shows no stress calculations. I know it is because of the boundaryfield definitions in the /0/D file and /constant/polyMesh/boundary files. I am not sure what else I can define on the boundaries because I tried fixedValue, but I don't know what is being considered constant for stress analysis. What am I doing wrong? File in /home/mpiuser010/cee618/project/angle/.
235
Albert S. Kim
04-25-2013
01:30 AM ET (US)
Dear Cindy:

Please try again

cp -r /opt/cee618s13/* ./
234
Cindy.LPerson was signed in when posted
04-25-2013
01:19 AM ET (US)
Dr. Kim,

I tried to get the files under /opt/cee619s13 but it says no file or directory.

[mpiuser013@fractal ~]$ cp -r /opt.cee618s13/* ./
cp: cannot stat `/opt.cee618s13/*': No such file or directory
233
Albert S. Kim
04-25-2013
01:04 AM ET (US)
Cindy:
Look at codes under /opt/cee619s13/

We are now using "gfortran" instead of ifort.
232
Albert S. Kim
04-25-2013
01:03 AM ET (US)
Edmund:
Consider a simpler case, which is variant from the tutorial example.
231
Albert S. Kim
04-25-2013
01:03 AM ET (US)
Dear Linyan:

Yes, follow the format posted.
230
Cindy.LPerson was signed in when posted
04-24-2013
11:20 PM ET (US)
Dr. Kim,

I been having trouble compiling the codes I wrote. I copied the example codes from the website and tried to run it but it doesn't work either.

[mpiuser013@fractal test]$ make
/opt/openmpi-1.6.3-intel-pbs/bin/mpif90 fpi.f90 -nowarn -limf -lm -o fpi.x
make: /opt/openmpi-1.6.3-intel-pbs/bin/mpif90: Command not found
make: *** [all] Error 127
[mpiuser013@fractal test]$ date; pwd; ls
Wed Apr 24 17:10:53 HST 2013
/home/mpiuser013/cee618s13/test
fpi.f90 Makefile PRLsample16.pbs

[mpiuser013@fractal cee618s13]$ make
ifort mycode.f90 -o mycode.x
make: ifort: Command not found
make: *** [all] Error 127
[mpiuser013@fractal cee618s13]$ date; pwd; ls
Wed Apr 24 17:11:51 HST 2013
/home/mpiuser013/cee618s13
Makefile mycode.f90 my.f90 test
229
Edmund
04-24-2013
11:11 PM ET (US)
Dr. Kim,

I was able to run a serial run of the angle bracket and got decent results. I tried running a refined mesh, but was unable to run because of errors. The issue is that now I tried re-running the mesh that produced the results before, and errors show up when OpenFOAM is in the middle of calculating. For my problem, OpenFOAM calculates 100 steps but after 30 steps, the calculations stop and errors show. I was careful when I changed the /constant/polyMesh/boundary and /0/D files. Why do the errors show up during calculating stresses and for the same mesh I had no issues with before? My files are in the /home/mpiuser010/cee618/project/angle/.
228
linyan
04-24-2013
09:08 PM ET (US)
Hi,Dr.Kim

I just want to check the margin of the report is 2 inch ? then almost half space of one paper is blank. The regular one is 1 inch.

Thanks.

linyan
227
Albert
04-24-2013
04:02 AM ET (US)
Dear All:
Please see below.
If you can please minimize disk usage.

3.7G mpiuser001
84M mpiuser002
52K mpiuser003
8.1M mpiuser004
792K mpiuser005
68M mpiuser006
8.3M mpiuser007
7.1G mpiuser008
6.5M mpiuser009
9.1M mpiuser010
52K mpiuser011
4.8G mpiuser012
1.1M mpiuser013
226
Albert
04-24-2013
03:56 AM ET (US)
Linyan:
At each time, let me know where is the file.
I cannot recall every details by searching mail folders.
225
Albert
04-24-2013
03:56 AM ET (US)
Dear Edmund and Qian:
Regarding OpenFOAM errors, they are mostly from input errors. So restart with simpler examples and previous cases, and then add one by one.
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